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Thread: Docking@Home Is Alpha Testing

  1. #1
    Join Date
    May 2006
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    Alberta, Canada
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    Docking@Home Is Alpha Testing

    yes another BOINC alpha test :headbang:
    Docking@Home
    http://docking.utep.edu/

    Project Description

    DAPLDS or Dynamically Adaptive Protein-Ligand Docking System is a project that involves collaboration among the University of Texas - El Paso, The Scripps Research Institute (TSRI), and the University of California - Berkeley. This project, through implementation and use of a cyber tool, DAPLDS, that enables adaptive multi-scale modeling in a GC environment, will further knowledge of the atomic details of protein-ligand interactions and, by doing so, will accelerate the discovery of novel pharmaceuticals. The goals of the project are:

    1. to explore the multi-scale nature of algorithmic adaptations in protein-ligand docking
    2. to develop cyber infrastructures based on computational methods and models that efficiently accommodate these adaptations.

    haven't seen a limit for testers
    they are looking linux and intel macs for app testing
    account creation is thru Boinc Manager

    they are using quorum of 3 (don't expect fast credits)

    :!: Attach with another project running or set your connection to network really low, the To Completion time is too low(says 6 mins) and will load up on WU's, but my first unit looks like it will take 2 to 3 hrs :!:

    Happy crunchin'
    Big Whiskey

  2. #2
    Join Date
    Dec 2003
    Posts
    1,945
    I'm in. Created the team too.

    Got a lot for my 1st batch. Unfortunately I had to have Spinhenge@Home running, and that has no checkpoints.

  3. #3
    Join Date
    May 2004
    Location
    Arlington, Texas
    Posts
    5,396
    I couldn't get in. It was disabled... Maybe next go round.... :cry:

  4. #4
    September 13, 2006
    Closed the account creation for now. We have enough windows users for testing. If you have an Intel-Mac or Linux machine write us an email at dockingadmin@utep.edu and we'll create an account for you. Please write down your comments, error reports and inputs in the forums and we'll get to the problems as soon as possible. Thanks!
    Go Linux
    If pro is opposite of con, then what is the opposite of progress?
    Congress!



  5. #5
    NeoGen's Avatar
    NeoGen is offline AMD Users Alchemist Moderator
    Site Admin
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    Oct 2003
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    North Little Rock, AR (USA)
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    8,451
    I'm too late too... and don't have an invitation code. :roll:

    Oh well... there's loads of projects to play with still.

    You guys that got in are now in charge of getting our team up on top. ;)

  6. #6
    Join Date
    Dec 2003
    Posts
    1,945
    September 12, 2006
    Revised estimate: our workunits currently take around 4 hours on an Intel P4 3GHz PC. We are working to get a better value for the estimated time shown on the GUI.
    Nice estimate, my 1st WU is now about 6.5h and it's a P4 3.0GHz.

    EDIT: And I have about 20 WUs to crunch due to BOINC thinking each WU takes 4mins. :mad:

  7. #7
    Join Date
    Dec 2003
    Posts
    1,945
    Update. Looks like my WU has crashed during school. :cry: Over 7 hours wasted.....

    EDIT: Another WU crashed. Looks like it crashes at completion. :mad: Forums say the error will be fixed in a day or 2. Mainwhile, I'm crunching for Spinhenge until I can work w/ D@H again.

  8. #8
    Join Date
    Sep 2006
    Posts
    16
    So far we have managed to climb to the 5th position, with gamer007 leading the way.

    The first few days was the pants for Windows clients (which of course I started with ) with 99.9% failure rate in crunching or downloading.

    I now have one of each Linux/Windows running successfully. I do not have any Macs so cannot comment on them.

    There is a big difference in run times between Win and Lin clients, Lin out producing the Win by a wide margin. The scoring is a bit off IMO, they award points to all based on the lowest claimed credit.

  9. #9
    AMDave's Avatar
    AMDave is offline Seeker of the exit clause Moderator
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    WELCOME to the forum, Zeppelin.
    Great to see you :thumbup:

  10. #10
    Join Date
    Apr 2005
    Location
    US
    Posts
    2,229
    I sent them a note saying I had linux systems and would like to test on linux for them. They sent me an invite. I've got 2 systems running at present. They also said that there was a crashing problem with the linux client on some systems. So will see how that goes. I've got a slackware and a mepis system running. Will see how that goes before I put any more on it.

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